Blood bacterial microbiome of Rodent98 M. natalensis (Hlalakahle) - SRA

SRX5967127: Blood bacterial microbiome of Rodent98 M. natalensis (Hlalakahle)
1 PACBIO_SMRT (PacBio RS II) run: 3,188 spots, 4.3M bases, 1.7Mb downloads

Design: PacBio Sequencing of the 16S rRNA gene

Submitted by: University of Pretoria

Study: Bacterial blood microbiome of rodents captured from a human/livestock/wildlife interface in rural South Africa

PRJNA546130 • SRP200360 • All experiments • All runs

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The aim of this project was to provide a comprehensive insight into bacterial pathogens in the blood of wild rodents captured from different habitat areas in the Mnisi community Mpumalanga Province South Africa using next-generation sequencing approaches.

Sample:

SAMN11953747 • SRS4874180 • All experiments • All runs

Organism: Mastomys natalensis

Library:

Name: F1R5

Instrument: PacBio RS II

Strategy: AMPLICON

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Runs: 1 run, 3,188 spots, 4.3M bases, 1.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR9194195	3,188	4.3M	1.7Mb	2019-06-04

ID:: 8002633

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